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Precision Gene Targeting in Stem Cells Corrects Disease-Causing Mutations [复制链接]

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楼主
发表于 2011-7-27 22:04 |只看该作者 |倒序浏览 |打印
    Using two distinct methods, Whitehead Institute researchers have successfully and consistently manipulated targeted genes in both human embryonic stem (ES) cells and induced pluripotent stem (iPS) cells (adult cells that have been reprogrammed to an embryonic stem cell-like state).
# T4 h$ J: U4 M8 \. S    In one case, scientists employed proteins known as zinc finger nucleases (ZFNs) to change a single base pair in the genome, allowing them either to insert or remove mutations known to cause early-onset Parkinson's disease (PD). The second method relies on proteins called transcription activator like effector nucleases (TALENs) capable of altering specific genes with similar efficiency and precision as ZFNs. Both sets of experiments were conducted in close collaboration with scientists at Sangamo BioSciences.1 k: [9 y$ S. v
Targeted genetic manipulation addresses a problem that has been plaguing human stem cell research -- the ability to cleanly and site-specifically modify the genomes of human ES and iPS cells. Realizing the therapeutic promise of these cells depends on such changes to fix disease-causing mutations before the cells could be transplanted into patients or to create cell lines that researchers can use to study genetic diseases.
/ O! x3 G) O4 B) n4 X    Such disease studies -- the much-heralded "disease in a dish" approach -- and the search for potentially disease-modifying drugs require the use of cells and controls that are genetically identical, except for a specific alteration whose impact can then be observed./ d. Z1 c4 V7 q0 T2 E
    "This is very relevant for diseases like Parkinson's, which likely will display only subtle phenotypes in the Petri dish. It is very important that the cells be genetically identical and have the same history, then make or remove only that mutation," says Whitehead Founding Member Rudolf Jaenisch. "If you use control cells from one person and a diseased cell from another person, it's like comparing apples and oranges."
9 d! }1 U8 _0 i1 t" I$ R    As reported in a paper published July 22 in Cell, first author Frank Soldner used ZFNs created by Sangamo BioSciences to generate, from both normal and PD patients' cells, sets of mutated and control cell lines. By either removing or adding a mutation to the alpha-synuclein gene associated with PD, Soldner created lines of cells whose genomes differ only by a single base pair. Subsequent differences seen in comparative studies of the cells can therefore be attributed to the mutation in question.
2 Q* U' w% n( A$ Q5 X% J! u' n    "ZFNs can transfer a mutation without any other alterations to the genome, such as leaving in unwanted pieces of DNA that could be harmful," says Soldner, a postdoctoral researcher in Jaenisch's lab. "This precision is ideal for drug research for PD and other diseases, but it is also one more step toward using ES or iPS cells therapeutically."
2 c7 W* p, ^  ?6 ~    In its continual quest to refine human stem cell technology, the Jaenisch lab has also been investigating other gene targeting approaches. One option is to use TALENs, which use a type of DNA-binding domain originally found in some plant pathogens. TALENs can be designed and created in academic labs.
; g4 W, ^! t) h9 I9 vTo compare TALENs' ability to alter genes to that of ZFNs', two postdoctoral researchers in Jaenisch's lab, Dirk Hockemeyer and Haoyi Wang, repeated an earlier ZFN experiment, this time using TALENs created by scientists at Sangamo BioSciences. In research reported earlier this month in Nature Biotechnology, Hockemeyer and Wang show that these TALENs can also modify genes as efficiently and precisely as ZFNs in ES and iPS cells.
% b, M0 L6 H" S9 j/ F$ O  K    "These are amazing proteins," says Wang. "In theory, everything ZFNs do, they should be able to do as well."
' v; Q  n  b! `1 r    "This opens up a lot of possibilities of what we will be able do because the generation of TALENs is extremely versatile," adds Hockemeyer. "It appears they, along with ZFNs, will help us overcome the challenges of developing human ES and iPS cell technology."
' P$ F% z" [/ h0 W5 P- U7 {; c    Soldner's research was supported by National Institutes of Health (NIH) and a Collaborative Innovation Award from the Howard Hughes Medical Institute (HHMI).
2 K: _/ Z1 C% L$ z6 n2 U: e8 `) l' dHockemeyer and Wang's research was supported by NIH and a grant from HHMI. Hockemeyer is a Merck fellow of the Life Sciences Research Foundation.
9 i8 I% o" `* |9 z' A    Research reported in both papers was conducted in close collaboration with Sangamo BioSciences.
+ h/ p/ q, O  F! _3 |    Rudolf Jaenisch's primary affiliation is with Whitehead Institute for Biomedical Research, where his laboratory is located and all his research is conducted. He is also a professor of biology at Massachusetts Institute of Technology.
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发表于 2011-7-27 22:13 |只看该作者
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发表于 2011-8-4 23:00 |只看该作者
(中文版报道 转摘) 怀特海德学院的研究者运用两种不同的方法,成功地对人类胚胎干细胞(ES)与人工诱导多能干细胞(iPS)内的靶向性基因实施了可重复的调控。!6 I. W( U2 m. n  T2 p
        其中一种方法是,利用称为锌指核酸酶(ZFN)的蛋白来改变基因组中的单一碱基对,从而插入或移除导致帕金森氏症(PD)早期发作的基因突变。第二种方法依赖于称为转录活化因子样效应核酸酶(TALEN)的蛋白(此蛋白可替代特定基因,其效率与精确性与ZFN相似)。两组实验均在于美国的Sangamo生物科学公司密切合作下完成。目标基因操作解决了一个一直困扰人类干细胞研究的难题——在保证位点特异性前提下,干净利落地改变人类ES与iPS细胞基因组。这种改变是实现干细胞的医疗价值的关键所在;临床移植前必须籍此修正致病突变,或籍此建立研究者用于研究遗传疾病的细胞系。
# |% f$ h) l( E7 }; m1 x) D5 f          此类疾病研究方法(即呼声甚高的“培养皿上的疾病”研究方法)以及对修正病变的潜力药的寻求,需要用到遗传特征相同的细胞及对照组(除非是一种特定修改,其作用可由此得以观察)。( N% E7 z! d* i$ m
         怀特海德创始人之一Rudolf Jaenisch说:“象帕金森症之类的疾病与此关系十分密切,因为这类疾病在培养皿中所表现的显型不易觉察。确认细胞有相同的遗传特征与相同的历史很重要。如果你用了来自某人的对照细胞以及来自另外一个人的病变细胞,那么两者之间的比较,就类似于苹果与桔子之间的对比。”6 z/ i* T9 G# g1 c
         根据发表于7月22日的《Cell》的一篇论文,第一作者Frank Soldner用Sangamo生物科学公司生产的ZFN来形成正常细胞与PD患者细胞、以及几组突变与对照细胞系。通过将一个突变移除或添加至与PD相关的a-突触核蛋白基因,Soldner建立了基因组之间仅有一个单一碱基对不同的细胞系。因此,基于这些细胞系进行的比较研究中观察到的结果差异可以归因于相关突变。
  I* g) _( G( u- K  I3 P  W        Soldner (Jaenisch实验室博士后研究员)说:“无须基因组的任何其它方面改变(比如说留下了有害的DNA碎片),ZFN就可以传递一个突变。这种精确性对治疗PD以及其它疾病的药物研究非常理想,当然,这也是将ES或iPS向医疗方向推进的一步。”4 Y4 ]8 [2 d8 J
         在进一步提高人类干细胞技术的持续探索中,Jaenisch实验室也一直在研究其它基因靶向方法。其中之一便是应用TALEN,此法利用的是最初发现于某些植物病原体的DNA结合区的一种类型。TALEN本身可在实验室中设计与创建。; y8 e$ M5 W) Q  G$ ]- ?% D; ]
           为了将TALEN与ZFN的改变基因的能力作比较,Jaenisch实验室的两位博士后研究员——Dirk Hockemeyer 与Haoyi Wang,重复了此前做过的ZFN实验,但这次用上了Sangamo公司的TALEN。在本月上旬发表于《Nature Biotechnology》(《Nature·生物技术》)的一篇论文中,两位作者显示:无论从效率还是从准确度上看,TALEN都与ES与iPS细胞中的ZFN一样,可谓异曲同工。
  d0 I# M$ [5 W9 q9 X         Wang就此评论说:“这些TALEN蛋白确实令人惊艳。从理论上说,ZFN能做的,TALEN也一样行。”Hockemeyer则补充:“因为这一代的TALEN特别多才多艺,所以该实验向我们展示了我们能做的许许多多的可能性。看起来TALEN与ZFN都将有助于克服开发人类ES与iPS细胞技术过程中我们所面临的诸多挑战性难题。”' V% r" s4 T  N' j2 {$ {- d4 u
        美国国立卫生研究院(NIH)与霍华德·休斯医学研究所(HHMI)合作创新奖金为Soldner的研究提供了资金。Hockemeyer 与Wang的研究由NIH以及HHMI专项拨款提供资金支持。
/ x- v1 n& ~$ V9 ?- I( h* x) g          两篇论文均在与Sangamo生物科学公司紧密合作下完成,Rudolf Jaenisch来自怀特海德学院,同时也是麻省理工的生物学教授
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板凳
发表于 2011-8-4 23:02 |只看该作者
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Genetic engineering of human pluripotent cells using TALE nucleases5 @# O* c, D) }$ |0 v' S$ D( a

+ L5 d9 O8 U/ R7 {, PDirk Hockemeyer,Haoyi Wang,Samira Kiani,Christine S Lai,Qing Gao,John P Cassady,Gregory J Cost,Lei Zhang,Yolanda Santiago,Jeffrey C Miller,Bryan Zeitler,         Jennifer M Cherone,         Xiangdong Meng,Sarah J Hinkley,Edward J Rebar,Philip D Gregory,Fyodor D Urnov         & Rudolf Jaenisch
, j% ?' C& v% E: e& iNature Biotechnology (2011) doi:10.1038/nbt.1927" [% M% i$ n% K9 s; _
Received 11 March 2011 Accepted 28 June 2011 Published online 07 July 2011& }' j) }2 ?+ W/ O5 E/ k

- D& e$ a: ~( K1 s# I0 r$ C1 K谁有权限传下啊~~

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发表于 2011-8-5 06:46 |只看该作者
Rudolf Jaenisch 总是走在最前面

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地板
发表于 2011-8-8 14:13 |只看该作者
回复 zorro 的帖子
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$ @/ k+ e- r0 |+ m1 D" T同样期待啊。

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发表于 2011-11-29 09:40 |只看该作者
好文章,求下载
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