PDF电子书：Biomass Conversion

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Biomass Conversion9 o8 K# V) d- c+ o$ Y
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Preface. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . vii  n, f* ]- ]0 Y% H9 m
Contributors. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . xi% ^1 P% |7 G! Q$ f" p
1 Challenges for Assessing the Performance of Biomass Degrading Biocatalysts . . . . . 1
9 o, p9 q4 G1 @2 x2 JMichael E. Himmel, Stephen R. Decker, and David K. Johnson7 A# M- Q2 K* A: k& Q* ~
PART I BIOMASS FEEDSTOCK AND CELLULOSE2 _2 C4 R) p& N* F# D9 K" b7 Q
2 Overview of Computer Modeling of Cellulose . . . . . . . . . . . . . . . . . . . . . . . . . . . . 110 r5 D: V  S2 {7 K8 S! v$ d+ X
Malin Bergenstråhle-Wohlert and John W. Brady
- f, x$ ^8 v0 Y  F" I. v3 Imaging Cellulose Using Atomic Force Microscopy . . . . . . . . . . . . . . . . . . . . . . . . 23- g/ E! }7 d& z6 \$ L
Shi-You Ding and Yu-San Liu# x/ c, s: H* Q; l8 ^
4 Preservation and Preparation of Lignocellulosic Biomass Samples- w% j: u! O* f1 W
for Multi-scale Microscopy Analysis. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 31) h: N( z1 A1 M% r$ Y& t
Bryon S. Donohoe, Peter N. Ciesielski, and Todd B. Vinzant/ i6 ^$ U4 j  Z
5 Coherent Raman Microscopy Analysis of Plant Cell Walls . . . . . . . . . . . . . . . . . . . . 49
/ x8 r4 h5 i& r/ ]; w9 |Yining Zeng, Michael E. Himmel, and Shi-You Ding
/ ^4 l, G$ G7 z! F6 Immunological Approaches to Plant Cell Wall and Biomass
. `: L3 D) x$ k5 uCharacterization: Glycome Profiling . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 61
  N/ p, i. t) mSivakumar Pattathil, Utku Avci, Jeffrey S. Miller, and Michael G. Hahn+ W: j- D  D( p8 E; |6 R3 V
7 Immunological Approaches to Plant Cell Wall and Biomass
3 U! A, F9 s9 FCharacterization: Immunolocalization of Glycan Epitopes. . . . . . . . . . . . . . . . . . . . 73
8 C) m8 Z1 t  [2 H8 K1 ]( w: o: c6 cUtku Avci, Sivakumar Pattathil, and Michael G. Hahn
1 x4 s, Z. W: D$ Q. A+ Q8 A Method to Evaluate Biomass Accessibility in Wet State Based; |" F' y( u4 s+ \8 F
on Thermoporometry. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 83
, C7 A9 ^1 d: KBon-Wook Koo and Sunkyu Park
9 C) }% j  ~+ n$ q! P3 F$ y4 \PART II PLANT CELL WALL6 `# b8 ~6 i. o; }: J
9 Cellulase Processivity . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 93
. e4 U# P( H+ w2 H4 s* ADavid B. Wilson and Maxim Kostylev" O7 f/ D0 X2 Z+ l' k
10 A Simple Method for Determining Specificity of Carbohydrate-Binding
1 Y% t: J8 L  C2 A& f2 A0 dModules for Purified and Crude Insoluble Polysaccharide Substrates. . . . . . . . . . . . 1010 ^6 P0 W- u& F9 G# X8 ^
Oren Yaniv, Sadanari Jindou, Felix Frolow, Raphael Lamed,* p  C4 v! u1 N; [# W5 N3 A
and Edward A. Bayer
3 c  L6 Y$ W& L( \; {3 T2 f2 y0 Z11 Bacterial Cadherin Domains as Carbohydrate Binding Modules:5 i# w0 W" L1 Q) H0 G9 B5 U
Determination of Affinity Constants to Insoluble Complex Polysaccharides. . . . . . . 1091 R1 b2 j# n9 {8 m
Milana Fraiberg, Ilya Borovok, Ronald M. Weiner, Raphael Lamed,/ f  p. E" D5 E* D' _. G
and Edward A. Bayer
5 y! V# N4 U' M6 d; V8 s12 Affinity Electrophoresis as a Method for Determining Substrate-Binding' `( V. F# ~5 J' w9 n
Specificity of Carbohydrate-Active Enzymes for Soluble Polysaccharides . . . . . . . . . 119
0 ^2 h1 C* g7 Z' V% ySarah Moraïs, Raphael Lamed, and Edward A. Bayer
/ R! N& B# I1 @/ u: Z: F2 w13 Single-Molecule Tracking of Carbohydrate-Binding Modules
- w' u  Y! ^+ N2 ~6 R& E- Won Cellulose Using Fluorescence Microscopy . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 129
3 \! X8 B9 D0 G0 ]2 mYu-San Liu, Shi-You Ding, and Michael E. Himmel$ K5 ~* S1 ]; g. y
14 Bioprospecting Metagenomics for New Glycoside Hydrolases. . . . . . . . . . . . . . . . . 141
" i! d) j, v+ P4 j6 r$ BJack Gilbert, Luen-Luen Li, Safiyh Taghavi, Sean M. McCorkle,
) g  Q, Q0 t; X' V, L* `) t2 i7 I4 L; ASusannah Tringe, and Daniel van der Lelie
; K' b+ E* |: Y15 Anaerobic High-Throughput Cultivation Method for Isolation
, }$ O0 K' e* n, O. N6 n3 J: vof Thermophiles Using Biomass-Derived Substrates . . . . . . . . . . . . . . . . . . . . . . . . 153
( S* Q, j) j3 Y# ~Scott D. Hamilton-Brehm, Tatiana A. Vishnivetskaya,
8 K( m6 }, O+ ~Steve L. Allman, Jonathan R. Mielenz, and James G. Elkins/ _6 ~# |/ ~5 k9 I  D
16 Assessing the Protein Concentration in Commercial Enzyme Preparations . . . . . . . 169
) \, f% C$ b- v0 G' b/ NWilliam S. Adney, Nancy Dowe, Edward W. Jennings,  x$ U8 Q1 p: I0 }1 h" d
Ali Mohagheghi, John Yarbrough, and James D. McMillan  s5 t/ W, e+ {! U$ m) l, v1 a  f
17 Reducing the Effect of Variable Starch Levels in Biomass; ?- @% r* {9 C% a
Recalcitrance Screening. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 181, z& h$ k2 p8 W6 y3 j
Stephen R. Decker, Melissa Carlile, Michael J. Selig, Crissa Doeppke,
) P2 {, [; O/ @  A8 a" F7 H3 {3 XMark Davis, Robert Sykes, Geoffrey Turner, and Angela Ziebell) Z+ [" {! x  S( K5 p
18 Analysis of Transgenic Glycoside Hydrolases Expressed in Plants:1 ^- Z% L+ f" m- x
T. reesei CBH I and A. cellulolyticus EI . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 197
' M8 W$ e( H- ]5 l4 W+ v" f% @Roman Brunecky, John O. Baker, Hui Wei, Larry E. Taylor,: b) ~% _# J  ~% g8 A
Michael E. Himmel, and Stephen R. Decker6 V2 P* H  k0 K6 i& O9 ^& ?
PART III LIGNINS AND HEMICELLULOSES
0 p' ]& ~  p* Y, S19 Structural Characterization of the Heteroxylans from Poplar and Switchgrass . . . . . 215
6 b/ y% l$ [+ R  S/ sKoushik Mazumder, Maria J. Peña, Malcolm A. O’Neill," k8 V1 C, X7 Y( ]2 n* m- b
and William S. York! B  U7 F$ g6 D$ [
20 Laser Microdissection and Genetic Manipulation Technologies1 k- P/ O; B/ h, U6 ^. j6 O
to Probe Lignin Heterogeneity and Configuration in Plant Cell Walls . . . . . . . . . . . 229
1 V: d" Y* n* t& Q6 IOliver R.A. Corea, Chanyoung Ki, Claudia L. Cardenas,
$ U# Y# B/ ?7 Z' z% _3 @Laurence B. Davin, and Norman G. Lewis
1 z: G$ g$ K4 a% h- o# P/ H! E6 r21 Lignin-Degrading Enzyme Activities . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 251
6 T8 N  x0 H, gYi-ru Chen, Simo Sarkanen, and Yun-Yan Wang
& c  W7 s& C1 ^6 S5 F# z5 [- dIndex . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 269
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