PDF电子书：Biomass Conversion

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Biomass Conversion
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3 p7 X0 {5 V2 n" p* \Preface. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . vii
4 P6 K* Y2 @  R3 [1 y! s, c& kContributors. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . xi0 f4 N! g" V" A  C# u
1 Challenges for Assessing the Performance of Biomass Degrading Biocatalysts . . . . . 1
# W8 x; f" _5 b) P/ j8 j/ ~* wMichael E. Himmel, Stephen R. Decker, and David K. Johnson
) P6 `; w$ R4 p8 }* w8 K" J! U3 I* L* I  kPART I BIOMASS FEEDSTOCK AND CELLULOSE" Y" C9 l' B+ d7 V
2 Overview of Computer Modeling of Cellulose . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11  L/ h4 c& O8 ^! \& s
Malin Bergenstråhle-Wohlert and John W. Brady
1 o  a- o* ^0 q2 T1 o3 Imaging Cellulose Using Atomic Force Microscopy . . . . . . . . . . . . . . . . . . . . . . . . 239 b; l2 o9 y, u3 D8 D
Shi-You Ding and Yu-San Liu
! J2 q- |( w0 \+ d+ W% X4 Preservation and Preparation of Lignocellulosic Biomass Samples
! R. d; l6 X8 H+ `6 h3 G0 Jfor Multi-scale Microscopy Analysis. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 314 y) h* D9 \/ V% a9 I; [
Bryon S. Donohoe, Peter N. Ciesielski, and Todd B. Vinzant' r' T! ~& E; V9 f2 ~3 m
5 Coherent Raman Microscopy Analysis of Plant Cell Walls . . . . . . . . . . . . . . . . . . . . 490 G; z+ k% l9 p3 V: J. X5 Y/ {2 ?
Yining Zeng, Michael E. Himmel, and Shi-You Ding2 X, n! ~& F; K" U- ^5 p5 O
6 Immunological Approaches to Plant Cell Wall and Biomass
; ~8 |8 M- ~# U, `4 f: I% KCharacterization: Glycome Profiling . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 61
0 s% j' ~" O7 T* T" ?Sivakumar Pattathil, Utku Avci, Jeffrey S. Miller, and Michael G. Hahn- A( `, {8 p. v. y2 k
7 Immunological Approaches to Plant Cell Wall and Biomass2 H9 D) E: V8 ]) b  J2 y9 m! R
Characterization: Immunolocalization of Glycan Epitopes. . . . . . . . . . . . . . . . . . . . 73+ i: a0 |! g2 E% c3 J% T5 K8 J/ \
Utku Avci, Sivakumar Pattathil, and Michael G. Hahn
) F. P) e% {8 U/ S8 A Method to Evaluate Biomass Accessibility in Wet State Based
# u2 E+ ?* Q7 ~( Non Thermoporometry. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 830 ]4 l& b! C/ }* B0 H
Bon-Wook Koo and Sunkyu Park% }  B; {9 S& y9 n1 g9 R* `
PART II PLANT CELL WALL8 E2 L0 h% A4 M  r( |
9 Cellulase Processivity . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 93/ y/ w" R  [4 d1 e! A6 r
David B. Wilson and Maxim Kostylev
5 e3 T3 T) t$ a( X9 f. F10 A Simple Method for Determining Specificity of Carbohydrate-Binding
  D9 H9 h3 w0 S1 M+ KModules for Purified and Crude Insoluble Polysaccharide Substrates. . . . . . . . . . . . 101
7 X. r* o- q' L5 E+ \Oren Yaniv, Sadanari Jindou, Felix Frolow, Raphael Lamed,! o& S; b. [/ ?* N8 p  |: {$ V6 D
and Edward A. Bayer
. ^' b9 D% O* S+ O$ R! q11 Bacterial Cadherin Domains as Carbohydrate Binding Modules:2 j8 P' S/ _5 w
Determination of Affinity Constants to Insoluble Complex Polysaccharides. . . . . . . 109
5 [1 Y% ^0 D6 v0 d& c0 m9 yMilana Fraiberg, Ilya Borovok, Ronald M. Weiner, Raphael Lamed,
+ M6 u, B( A8 Q, u; V2 iand Edward A. Bayer
0 r' \) b3 S1 p  z. n; D12 Affinity Electrophoresis as a Method for Determining Substrate-Binding
' G6 s7 W: h' B2 q% S; ~Specificity of Carbohydrate-Active Enzymes for Soluble Polysaccharides . . . . . . . . . 119! k* g3 E# `5 M  ?3 B7 p/ l2 u4 `
Sarah Moraïs, Raphael Lamed, and Edward A. Bayer. ~2 T- k: E7 x- R
13 Single-Molecule Tracking of Carbohydrate-Binding Modules9 @8 G) e/ g8 r* d
on Cellulose Using Fluorescence Microscopy . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 129+ v* r% |5 G' p+ v
Yu-San Liu, Shi-You Ding, and Michael E. Himmel4 a' k8 y1 ^, N
14 Bioprospecting Metagenomics for New Glycoside Hydrolases. . . . . . . . . . . . . . . . . 1417 T# ?& k3 Z* b3 q
Jack Gilbert, Luen-Luen Li, Safiyh Taghavi, Sean M. McCorkle,6 M( y4 T5 W: p8 a1 `% D4 x2 C
Susannah Tringe, and Daniel van der Lelie1 S  y1 K* |3 c, n2 V* V
15 Anaerobic High-Throughput Cultivation Method for Isolation
. B0 h3 M( A4 V/ x  C6 Hof Thermophiles Using Biomass-Derived Substrates . . . . . . . . . . . . . . . . . . . . . . . . 1537 q  ^% O% o' X/ B
Scott D. Hamilton-Brehm, Tatiana A. Vishnivetskaya,$ O3 N4 F' s$ h  M% L9 V, I% B
Steve L. Allman, Jonathan R. Mielenz, and James G. Elkins
6 m% z# ^: t" y' I% d16 Assessing the Protein Concentration in Commercial Enzyme Preparations . . . . . . . 1697 S4 K5 g2 l) T3 }( y5 B. s4 O8 M$ a
William S. Adney, Nancy Dowe, Edward W. Jennings,
* D* N$ f9 h* j5 l+ tAli Mohagheghi, John Yarbrough, and James D. McMillan
$ v9 a+ u! t7 M; I0 F. ?5 [17 Reducing the Effect of Variable Starch Levels in Biomass
6 [+ y9 W, h) r  m9 D4 f$ b. kRecalcitrance Screening. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 181( _& `% X$ G$ R7 K' N- ^" [. N
Stephen R. Decker, Melissa Carlile, Michael J. Selig, Crissa Doeppke,4 Z/ q. C  D6 J9 D$ z$ ?7 p% ^  R
Mark Davis, Robert Sykes, Geoffrey Turner, and Angela Ziebell
# u1 n3 R- _* Q; W' \8 b. p1 M18 Analysis of Transgenic Glycoside Hydrolases Expressed in Plants:
( A* a; B# n  W- _( PT. reesei CBH I and A. cellulolyticus EI . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 197
4 Q* a; [6 R+ }1 |) |3 t5 \Roman Brunecky, John O. Baker, Hui Wei, Larry E. Taylor,
# ~" ~+ |7 }9 {* r( zMichael E. Himmel, and Stephen R. Decker
* W+ N6 e! J% C! lPART III LIGNINS AND HEMICELLULOSES  a* w9 U  [) p& C. N$ d
19 Structural Characterization of the Heteroxylans from Poplar and Switchgrass . . . . . 215
5 }3 `1 U/ @3 W: hKoushik Mazumder, Maria J. Peña, Malcolm A. O’Neill,
& X8 j3 i- w7 R. v: N7 k7 gand William S. York9 j- U) q+ X! I! {
20 Laser Microdissection and Genetic Manipulation Technologies
! {+ w# V6 [3 _0 \. e8 @; fto Probe Lignin Heterogeneity and Configuration in Plant Cell Walls . . . . . . . . . . . 229
# B4 s* C8 ^4 \& POliver R.A. Corea, Chanyoung Ki, Claudia L. Cardenas,
. _$ E7 {/ C5 I/ l! g3 b; ?Laurence B. Davin, and Norman G. Lewis
" u. f2 j. A! W' G. x' f# c21 Lignin-Degrading Enzyme Activities . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2512 @& D" q2 a+ o$ {2 w( m
Yi-ru Chen, Simo Sarkanen, and Yun-Yan Wang
* H# a; S- O) \; G! L" y4 J6 yIndex . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 269
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