PDF电子书：Biomass Conversion

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! g6 J8 v, Z* [+ z8 p* K  BBiomass Conversion$ ~, o" @: u) G
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Preface. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . vii( W* I+ ^6 i* A9 E3 M" B
Contributors. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . xi, r3 T; s8 }2 h9 W7 n
1 Challenges for Assessing the Performance of Biomass Degrading Biocatalysts . . . . . 1
/ v  ?$ T( `3 }0 LMichael E. Himmel, Stephen R. Decker, and David K. Johnson
2 B5 b; r/ _1 c" z( fPART I BIOMASS FEEDSTOCK AND CELLULOSE
8 F( M* w# H9 l% C: f6 o2 Overview of Computer Modeling of Cellulose . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11* v5 B9 P) L0 g, ~0 y- j
Malin Bergenstråhle-Wohlert and John W. Brady, y: ~1 R/ D& `# N% `
3 Imaging Cellulose Using Atomic Force Microscopy . . . . . . . . . . . . . . . . . . . . . . . . 23! Y- K* y$ d+ k$ g0 ^* B; m
Shi-You Ding and Yu-San Liu) j, X$ B- A# Q* L) A/ p; K
4 Preservation and Preparation of Lignocellulosic Biomass Samples
2 ~7 x* {( t7 `: f; f7 ]for Multi-scale Microscopy Analysis. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 312 p2 g. y8 W  j. d& x/ \' l
Bryon S. Donohoe, Peter N. Ciesielski, and Todd B. Vinzant, u8 `5 _7 A$ @2 {3 b5 o7 a
5 Coherent Raman Microscopy Analysis of Plant Cell Walls . . . . . . . . . . . . . . . . . . . . 49
% x' H1 K$ Z2 N$ B' h: w( NYining Zeng, Michael E. Himmel, and Shi-You Ding) p, b& H' N; m: `: ]% V
6 Immunological Approaches to Plant Cell Wall and Biomass
1 j  V2 m6 @+ |) w; z/ U6 tCharacterization: Glycome Profiling . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 61+ A. I+ ?7 \( L0 K" F7 ]1 B) @# T/ f
Sivakumar Pattathil, Utku Avci, Jeffrey S. Miller, and Michael G. Hahn5 N9 x9 q5 {% h7 K4 k, X& Y; |3 }
7 Immunological Approaches to Plant Cell Wall and Biomass
- q; m- ]  D$ G' A! H( C4 jCharacterization: Immunolocalization of Glycan Epitopes. . . . . . . . . . . . . . . . . . . . 73
0 y, {* f: N3 P6 \( s2 R  n, MUtku Avci, Sivakumar Pattathil, and Michael G. Hahn$ x, r. m" T- d& ^; m$ \
8 A Method to Evaluate Biomass Accessibility in Wet State Based
2 ~0 u% Z- f1 e+ e3 A5 non Thermoporometry. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 83
$ m, I; y  H2 o; w8 I+ _& [9 j' t8 t0 iBon-Wook Koo and Sunkyu Park
0 L) i% I9 j0 g9 O, gPART II PLANT CELL WALL
) w3 c/ W% f- C( h. S5 S9 Cellulase Processivity . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 93& R- f( i- Y5 j) o' [: C9 Y
David B. Wilson and Maxim Kostylev% L$ {$ E- K3 G4 A& ]% L0 V
10 A Simple Method for Determining Specificity of Carbohydrate-Binding
7 A" [1 l( m4 z6 b6 VModules for Purified and Crude Insoluble Polysaccharide Substrates. . . . . . . . . . . . 101
1 J: F* X9 o! [Oren Yaniv, Sadanari Jindou, Felix Frolow, Raphael Lamed,) t# V/ p9 K, v: I6 v
and Edward A. Bayer
2 M& }5 k, b# T! ?9 s2 {11 Bacterial Cadherin Domains as Carbohydrate Binding Modules:
; Z6 \% b  x- R1 w- ?& }Determination of Affinity Constants to Insoluble Complex Polysaccharides. . . . . . . 109
! i4 g  m1 r4 P% |) Z1 g# TMilana Fraiberg, Ilya Borovok, Ronald M. Weiner, Raphael Lamed,3 P0 |2 W, ?6 L) o, n
and Edward A. Bayer
8 ^* z" v$ n. x8 \$ B1 ~12 Affinity Electrophoresis as a Method for Determining Substrate-Binding* c" d8 @) N% i) C! x
Specificity of Carbohydrate-Active Enzymes for Soluble Polysaccharides . . . . . . . . . 119% u5 D+ F& A! q% G! w  \2 q. x
Sarah Moraïs, Raphael Lamed, and Edward A. Bayer7 J* E: F* X7 i+ C
13 Single-Molecule Tracking of Carbohydrate-Binding Modules
6 g: e; {4 X' c% \3 Von Cellulose Using Fluorescence Microscopy . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1294 [( ]; C; M2 k9 _: k2 `. X
Yu-San Liu, Shi-You Ding, and Michael E. Himmel0 `# L& i) \# ?, N( Y3 Z" H+ o* r
14 Bioprospecting Metagenomics for New Glycoside Hydrolases. . . . . . . . . . . . . . . . . 141
) q( _" y& A# S: d/ WJack Gilbert, Luen-Luen Li, Safiyh Taghavi, Sean M. McCorkle,
# K( L4 t, @  F/ a9 E% L: HSusannah Tringe, and Daniel van der Lelie2 p. h! z) f3 s4 M2 _% P6 o
15 Anaerobic High-Throughput Cultivation Method for Isolation
9 r* E! B1 Q4 C0 ?  c! |( pof Thermophiles Using Biomass-Derived Substrates . . . . . . . . . . . . . . . . . . . . . . . . 153
1 z* H1 }( }4 e. H3 K' o# R! o5 ]# G+ zScott D. Hamilton-Brehm, Tatiana A. Vishnivetskaya,
1 y( q; [+ U: BSteve L. Allman, Jonathan R. Mielenz, and James G. Elkins
9 P/ J0 W$ H, R4 I! N  q16 Assessing the Protein Concentration in Commercial Enzyme Preparations . . . . . . . 1696 V1 A6 e: C- W5 K( F9 e! c
William S. Adney, Nancy Dowe, Edward W. Jennings,8 K' @0 I0 Q& Q
Ali Mohagheghi, John Yarbrough, and James D. McMillan- o2 v& B5 I, |# K% H3 A
17 Reducing the Effect of Variable Starch Levels in Biomass
% O/ A4 Q7 v! `Recalcitrance Screening. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 181- U$ s* i2 l0 F8 j
Stephen R. Decker, Melissa Carlile, Michael J. Selig, Crissa Doeppke,5 h+ ^# N: v/ J& `4 C$ z
Mark Davis, Robert Sykes, Geoffrey Turner, and Angela Ziebell
; ^! Z9 L6 g4 J% V18 Analysis of Transgenic Glycoside Hydrolases Expressed in Plants:8 J) u/ F* o7 a/ h$ h6 q& \, S
T. reesei CBH I and A. cellulolyticus EI . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 197
" r# R0 V4 ~9 Y4 j( gRoman Brunecky, John O. Baker, Hui Wei, Larry E. Taylor,$ b  v1 v  s. b( m, ~5 }
Michael E. Himmel, and Stephen R. Decker% W5 L. }, W  f( w5 ]
PART III LIGNINS AND HEMICELLULOSES2 h" s/ G8 ]3 D; d
19 Structural Characterization of the Heteroxylans from Poplar and Switchgrass . . . . . 2156 G" n6 G; E/ j+ W( B; ~+ J( s. B
Koushik Mazumder, Maria J. Peña, Malcolm A. O’Neill,  o% p3 O% m1 y; ]
and William S. York
+ U0 O; s2 I7 r. z6 ~1 T# j20 Laser Microdissection and Genetic Manipulation Technologies
4 w4 `+ b# w2 ito Probe Lignin Heterogeneity and Configuration in Plant Cell Walls . . . . . . . . . . . 229) a# [  I0 o) u" a% l0 g
Oliver R.A. Corea, Chanyoung Ki, Claudia L. Cardenas,4 u" |( a3 O: E, U
Laurence B. Davin, and Norman G. Lewis9 S  t; H+ x( c, P/ o9 S% G
21 Lignin-Degrading Enzyme Activities . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2510 J4 q! v6 q, F
Yi-ru Chen, Simo Sarkanen, and Yun-Yan Wang  I. F) W  l1 F7 M
Index . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 269
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