[表观宝典] 经典文献汇总

恒宇

1. Orlando V. Mapping chromosomal proteins in vivo by formaldehyde-crosslinked-chromatin immunoprecipitation. Trends Biochem Sci 2000; 25: 99-104.$ W$ D) h: f. m* h# Q* t* s% C
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2. McGhee JD, von Hippel PH. Formaldehyde as a probe of DNA structure. II. Reaction with endocyclic imino groups of DNA bases. Biochemistry 1975; 14: 1297-1303.
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3. McGhee JD, von Hippel PH. Formaldehyde as a probe of DNA structure. I. Reaction with exocyclic amino groups of DNA bases. Biochemistry 1975; 14: 1281-1296.! S0 `6 V8 P; K1 R8 I  Y; C1 j
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4. Fujita N, Wade PA. Use of bifunctional cross-linking reagents in mapping genomic distribution of chromatin remodeling complexes. Methods 2004; 33: 81-85.2 Z) W* m. n2 K& ?5 w& e) d
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5. Thorstenson YR, Hunicke-Smith SP, Oefner PJ, Davis RW. An automated hydrodynamic process for controlled, unbiased DNA shearing. Genome Res 1998; 8: 848-855.$ u$ f  o0 G7 n" }0 _$ E
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6. O'Neill LP, VerMilyea MD, Turner BM. Epigenetic characterization of the early embryo with a chromatin immunoprecipitation protocol applicable to small cell populations. Nat Genet 2006; 38: 835-841.
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# U" O3 v) r8 c& E5 ]/ X7. Buck MJ, Lieb JD. ChIP-chip: considerations for the design, analysis, and application of genome-wide chromatin immunoprecipitation experiments. Genomics 2004; 83: 349-360.1 R, P1 c% L5 L( N& Z; T
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8. Weinmann AS et al. Isolating human transcription factor targets by coupling chromatin immunoprecipitation and CpG island microarray analysis. Genes Dev 2002; 16: 235-244.
% K! P/ r  H, d/ `' {9. Warrington JA, Nair A, Mahadevappa M, Tsyganskaya M. Comparison of human adult and fetal expression and identification of 535 housekeeping/maintenance genes. Physiol Genomics 2000; 2: 143-147.( m2 |3 z! e; ]0 n3 E  j$ U& S, a; E

0 I, W) q. @( F; b: P2 z10. Waterborg JH. Sequence analysis of acetylation and methylation in two histone H3 variants of alfalfa. J Biol Chem 1990; 265: 17157-17161.
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11. Waterborg JH. Multiplicity of Histone H3 Variants in Wheat, Barley, Rice, and Maize. Plant Physiol 1991; 96: 453-458.  N- c7 m/ K7 R, V% v; J) |

3 ?7 X; U3 _/ v; b12. Waterborg JH. Existence of two histone H3 variants in dicotyledonous plants and correlation between their acetylation and plant genome size. Plant Mol Biol 1992; 18: 181-187.
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13. Waterborg JH. Identification of five sites of acetylation in alfalfa histone H4. Biochemistry 1992; 31: 6211-6219.9 O" k4 Q- p# F6 c* ]. Z. W6 g/ b
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14. Waterborg JH. Dynamic methylation of alfalfa histone H3. J Biol Chem 1993; 268: 4918-4921.3 m; F- n' z) k

; T) C  Z# T* n) N6 E2 h15. Waterborg JH. Histone synthesis and turnover in alfalfa. Fast loss of highly acetylated replacement histone variant H3.2. J Biol Chem 1993; 268: 4912-4917.1 f0 G5 R8 Q3 e- M, c

; J3 g8 ~  a5 @2 _0 X# x16. Waterborg JH. Dynamics of histone acetylation in vivo. A function for acetylation turnover? Biochem Cell Biol 2002; 80: 363-378.
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' f' Q% K, a+ N- l: B* x17. Waterborg JH, Kapros T. Kinetic analysis of histone acetylation turnover and Trichostatin A induced hyper- and hypoacetylation in alfalfa. Biochem Cell Biol 2002; 80: 279-293.
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18. Wang H, Tang W, Zhu C, Perry SE. A chromatin immunoprecipitation (ChIP) approach to isolate genes regulated by AGL15, a MADS domain protein that preferentially accumulates in embryos. Plant J 2002; 32: 831-843.
- Z  J0 D% d  B, }Cell, Vol. 115, 751–763, December 12, 2003, Copyright 2003 by Cell Press
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6 h1 i# W( b5 {/ [1 F1 a) Y- r" ?3 bTitle: Estrogen Receptor-  Directs Ordered, Cyclical, and Combinatorial Recruitment1 O4 v4 Q* w7 f' Y$ Y/ f
of Cofactors on a Natural Target Promoter.
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使用了ChIP, reChIP, IP及PCR，RP-PCR技术。

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没有原文啊