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本帖最后由 细胞海洋 于 2013-5-3 11:03 编辑
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RNA and DNA Editing
0 V6 p5 } H# S& aMethods and Protocols1 w2 m$ s' _$ ?9 k
Series: Methods in Molecular Biology, Vol. 718+ j2 b/ T4 F4 P9 y9 N& W
Aphasizhev, Ruslan (Ed.)
+ E- o4 r/ ~# A: P* i8 w2 e2011, XIII, 275p. 57 illus., 1 illus. in color.! W9 ?% u4 Y' Q. K6 G( D
A product of Humana Press/ {1 ^7 R" z! L% X8 [- k3 \$ M! B
* a6 Q5 A; v- J0 g8 z$ h# E0 }( Y& x5 C! a$ ]# P' E
; l# Y& B/ l: x8 p1 ] APart I Uracil Insertion/Deletion RNA Edi ting
u, R$ L9 z# B. E6 r. e" jin Mitochondrion of Trypanosoma brucei
" o2 X. J, j: f4 F4 f. j1 Three-Dimensional Reconstruction of Trypanosoma brucei/ P# o+ F g0 x1 E/ o& ~ c
Editosomes Using Single-Particle Electron Microscopy . . . . . . . 3) Z) O/ ]. b3 r
H. Ulrich Göringer, Holger Stark, Cordula Böhm,) i0 U" H* |6 [$ o1 t
Bjoern Sander, and Monika M. Golas
8 Q* y1 \6 H! a' q R+ U5 ~; k2 iCODA: RNAi-Based Inducible Knock-In System
2 d9 G2 L R& q! Sin Trypanosoma brucei . . 23) n) w/ F3 g8 n" |) `
Gene-Errol Ringpis, Richard H. Lathrop, and Ruslan Aphasizhev
" @+ p( _, J* U' y8 QPart II A denosine to Inosine RNA Edi ting
1 M+ ~1 E+ T# E/ \/ K% P% `3 Perturbing A-to-I RNA Editing Using Genetics; g/ {. ]: |2 a7 f$ N. E
and Homologous Recombination . . 41
" |7 A; d1 C( j$ V( CCynthia J. Staber, Selena Gell, James E.C. Jepson, and Robert A. Reenan% D; `- @0 v, d1 r, \! U6 Y* e
4 Laser Microdissection and Pressure Catapulting of Single
9 e6 s1 G* S# h* YHuman Motor Neurons for RNA Editing Analysis . . . . . . 75# U$ d) q6 w! a
Hui Sun, Aruna Raja, Mary A. O’Connell, Valerie Mann, Brendon Noble,
9 M# ?; l5 W9 a( {and Liam P. Keegan
) ^! }' c: b" @% y5 Biochemical Identification of A-to-I RNA Editing Sites( [5 R$ J+ N# w% o
by the Inosine Chemical Erasing (ICE) Method . . . . . . . . . . . . . . . . . . . . . 89
1 D, Q2 A6 U. UMasayuki Sakurai and Tsutomu Suzuki% \% u2 V* b* u, x
Part III C ytidi ne to Uracil RNA and DNA Edi ting
% z( R0 o& e$ W% Y x6 Identifying mRNA Editing Deaminase Targets by RNA-Seq . . 103
: o5 o7 y( d _1 g# g, fBrad R. Rosenberg, Scott Dewell, and F. Nina Papavasiliou
. o$ }+ \8 M, j% y7 Mouse and Other Rodent Models of C to U RNA Editing . . . . . . . . . . . . . 121
8 ?6 `6 S- g% ?+ TValerie Blanc and Nicholas O. Davidson' A1 T9 L4 a& r
8 In Vivo Analysis of RNA Editing in Plastids . . . . . . . . . . . 137; l7 f5 w; T+ b- t, Q0 d
Stephanie Ruf and Ralph Bock
- D y: R3 u3 i1 a1 h3 P7 s9 Identifying Specific Trans-Factors of RNA Editing in Plant
7 h9 {2 b8 [) f+ b6 } XMitochondria by Multiplex Single Base Extension Typing . . . . . . . . . . 151
" B" B8 l2 F2 l/ a0 e( mMizuki Takenaka% _/ M% S* O; X) j
10 Complementation of Mutants in Plant Mitochondrial RNA- } z" U' c9 V7 p% ?, S+ T
Editing by Protoplast Transfection . . . . . . . . . . . . . . . . . . . . . . . . . . 163
2 I" m& L5 k5 L9 Q+ AMizuki Takenaka and Anja Zehrmann
" G, T. n# j N/ C+ w' Z5 o11 A High-Throughput Assay for DNA Deaminases . . . . . . . . . . . . . . . . . . . . . . . 171
5 |% l# p6 ^1 `: Y3 @2 ^/ h! gMeng Wang, Cristina Rada, and Michael S. Neuberger
3 m; p9 }# V' Z) Q) g" d2 J% }12 Biochemical Fractionation and Purification1 W6 L' H& V7 W6 K
of High-Molecular-Mass APOBEC3G Complexes . . . . . . . . . . . . . . . . . . . . . . . 185( l1 P$ i: d" D s8 f
Ya-Lin Chiu
( R+ V* G, M+ n, x% x( yPart IV tRNA Edi ting and RNA Modi fications
8 u' I% R: h% J: C6 P9 f- h& ~13 Analysis of tRNA Editing in Native and Synthetic Substrates . . . . . . . 209
2 F8 T9 X! H2 ]Jessica L. Spears, Kirk W. Gaston, and Juan D. Alfonzo
) d8 C& a1 ]( [8 r a14 Post-transcriptional Modification of RNAs by Artificial Box6 T3 W% n% {, t
H/ACA and Box C/D RNPs . . . . . . . . . . . 227" x% z; |" J( z! _# P& a) s: H
Chao Huang, John Karijolich, and Yi-Tao Yu0 V. C1 ]) A R1 W# |. ?" j4 K
15 Functional Analysis of Noncoding RNAs in Trypanosomes:
z# |% s/ X4 R5 E' u8 Y7 IRNA Walk, a Novel Approach to Study RNA–RNA Interactions
( S: d# s3 \* fBetween Small RNA and Its Target . . 245
I/ \5 _3 Z( V& j- W9 ?5 X! kChaim Wachtel and Shulamit Michaeli
7 ^5 u; U- g3 R$ [. ]; ~16 A Post-Labeling Approach for the Characterization7 t9 p6 ?6 t8 X! s9 f
and Quantification of RNA Modifications Based on
# p% \- x S3 e( _) lSite-Directed Cleavage by DNAzymes . . . . . . . . . . . . . . . . . . . . . . . . . . . . 259) ~7 C# p' ?7 U+ d
Madeleine Meusburger, Martin Hengesbach, and Mark Helm
( T2 o K2 S# _Index . 271
# B8 w9 |% s! Y. j7 T. A* W1 j) i$ v y
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发表于 2013-5-3 09:35
发表于 2013-5-3 14:37
感谢分享啊！